deb_control_files:
- control
- md5sums
deb_fields:
Architecture: all
Depends: ruby
Description: |-
domain specific language (DSL) for processing the VCF format
Bio-vcf provides a domain specific language (DSL) for processing the
VCF format. Record named fields can be queried with regular
expressions, e.g.
.
sample.dp>20 and rec.filter !~ /LowQD/ and rec.tumor.bcount[rec.alt]>4
.
Bio-vcf is a new generation VCF parser, filter and converter. Bio-vcf
is not only very fast for genome-wide (WGS) data, it also comes with a
really nice filtering, evaluation and rewrite language and it can
output any type of textual data, including VCF header and contents in
RDF and JSON.
Homepage: https://github.com/vcflib/bio-vcf
Installed-Size: '141'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: bio-vcf
Priority: optional
Ruby-Versions: all
Section: science
Version: 0.9.5-3
srcpkg_name: bio-vcf
srcpkg_version: 0.9.5-3