Basic Statistics
Measure | Value |
---|---|
Filename | SRR3192657_1_val_1.fq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 93144645 |
Sequences flagged as poor quality | 0 |
Sequence length | 20-101 |
%GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCATTC | 41685 | 0.0 | 18.882965 | 94-95 |
CGGGTGT | 30940 | 0.0 | 17.9967 | 1 |
TACCGCG | 17795 | 0.0 | 17.427397 | 1 |
TGCGTCG | 31470 | 0.0 | 16.298244 | 9 |
CCGAACG | 11235 | 0.0 | 16.115082 | 3 |
GTCCGAA | 13825 | 0.0 | 16.02276 | 1 |
CGGTATA | 19730 | 0.0 | 15.781743 | 4 |
CGGGGGA | 57440 | 0.0 | 15.198483 | 1 |
GCGGGTT | 20865 | 0.0 | 15.198452 | 1 |
CGGGGTT | 54205 | 0.0 | 15.193583 | 1 |
CTATACC | 32415 | 0.0 | 15.1134615 | 94-95 |
CGAACGG | 10260 | 0.0 | 14.924661 | 4 |
AACGGTA | 10180 | 0.0 | 14.767627 | 6 |
GTGCGTC | 39035 | 0.0 | 14.522757 | 8 |
TCGCATT | 44400 | 0.0 | 14.355631 | 94-95 |
GCGGTGT | 44675 | 0.0 | 14.302526 | 2 |
ACTATCG | 14545 | 0.0 | 13.902161 | 58-59 |
TAGATCG | 10585 | 0.0 | 13.762882 | 8 |
CGGGGGG | 71870 | 0.0 | 13.6069145 | 1 |
CGGGCTA | 8805 | 0.0 | 13.505781 | 1 |