deb_control_files:
- control
- md5sums
deb_fields:
Architecture: all
Breaks: libbio-perl-perl (<< 1.7.3)
Depends: perl:any, libapache-dbi-perl, libbio-perl-perl, libbio-db-biofetch-perl,
libcgi-pm-perl
Description: |-
Storage and retrieval of sequence annotation data
Bio::DB::GFF provides fast indexed access to a sequence annotation database.
It supports multiple database types (ACeDB, relational), and multiple schemas
through a system of adaptors and aggregators.
.
The following operations are supported by this module:
.
- retrieving a segment of sequence based on the ID of a landmark
.
- retrieving the DNA from that segment
.
- finding all annotations that overlap with the segment
.
- finding all annotations that are completely contained within the
segment
.
- retrieving all annotations of a particular type, either within a
segment, or globally
.
- conversion from absolute to relative coordinates and back again,
using any arbitrary landmark for the relative coordinates
.
- using a sequence segment to create new segments based on relative
offsets
Homepage: https://metacpan.org/release/Bio-DB-GFF
Installed-Size: '855'
Maintainer: Michael R. Crusoe <michael.crusoe@gmail.com>
Package: libbio-db-gff-perl
Priority: optional
Replaces: libbio-perl-perl (<< 1.7.3)
Section: perl
Version: 1.7.4-1
srcpkg_name: libbio-db-gff-perl
srcpkg_version: 1.7.4-1