Uses of Interface
pal.treesearch.ConstraintModel
Packages that use ConstraintModel
Package
Description
Classes for the analysis of "measurably evolving populations" (mep).
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Uses of ConstraintModel in pal.mep
Methods in pal.mep that return ConstraintModelModifier and TypeMethodDescriptionDeltaModel.buildConstraintModel
(SampleInformation si, MolecularClockLikelihoodModel.Instance likelihoodModel) MutationRateModel.Factory.buildConstraintModel
(SampleInformation si, MolecularClockLikelihoodModel.Instance likelihoodModel) -
Uses of ConstraintModel in pal.treesearch
Classes in pal.treesearch that implement ConstraintModelModifier and TypeClassDescriptionclass
class
class
class
class
class
Methods in pal.treesearch with parameters of type ConstraintModelModifier and TypeMethodDescriptionGeneralConstraintGroupManager.Store.getConstraintGroupManager
(String[] leafLabelSet, ConstraintModel constraints) Constructors in pal.treesearch with parameters of type ConstraintModelModifierConstructorDescriptionGeneralConstructionTool
(ConstraintModel constraints, Alignment alignment) The constructorGeneralLikelihoodSearcher
(Node baseTopology, Alignment baseAlignment, ConstraintModel constraintModel)