Package picard.sam.SamErrorMetric
Class ReadBaseStratification.BinnedReadCycleStratifier
java.lang.Object
picard.sam.SamErrorMetric.ReadBaseStratification.BinnedReadCycleStratifier
- All Implemented Interfaces:
ReadBaseStratification.RecordAndOffsetStratifier<ReadBaseStratification.CycleBin>
- Enclosing class:
- ReadBaseStratification
public static class ReadBaseStratification.BinnedReadCycleStratifier
extends Object
implements ReadBaseStratification.RecordAndOffsetStratifier<ReadBaseStratification.CycleBin>
Stratifies into quintiles of read cycle.
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Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionstratify
(htsjdk.samtools.util.SamLocusIterator.RecordAndOffset recordAndOffset, htsjdk.samtools.reference.SamLocusAndReferenceIterator.SAMLocusAndReference locusInfo)
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Constructor Details
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BinnedReadCycleStratifier
public BinnedReadCycleStratifier()
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Method Details
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stratify
public ReadBaseStratification.CycleBin stratify(htsjdk.samtools.util.SamLocusIterator.RecordAndOffset recordAndOffset, htsjdk.samtools.reference.SamLocusAndReferenceIterator.SAMLocusAndReference locusInfo) - Specified by:
stratify
in interfaceReadBaseStratification.RecordAndOffsetStratifier<ReadBaseStratification.CycleBin>
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getSuffix
- Specified by:
getSuffix
in interfaceReadBaseStratification.RecordAndOffsetStratifier<ReadBaseStratification.CycleBin>
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