Package picard.sam.markduplicates.util
Class SamRecordWithOrdinalAndSetDuplicateReadFlag
java.lang.Object
htsjdk.samtools.util.SamRecordWithOrdinal
picard.sam.markduplicates.util.SamRecordWithOrdinalAndSetDuplicateReadFlag
public class SamRecordWithOrdinalAndSetDuplicateReadFlag
extends htsjdk.samtools.util.SamRecordWithOrdinal
This class sets the duplicate read flag as the result state when examining sets of records.
-
Constructor Summary
ConstructorsConstructorDescriptionSamRecordWithOrdinalAndSetDuplicateReadFlag
(htsjdk.samtools.SAMRecord record, long recordIndex) -
Method Summary
Methods inherited from class htsjdk.samtools.util.SamRecordWithOrdinal
getRecord, getRecordOrdinal, setRecord, setRecordOrdinal
-
Constructor Details
-
SamRecordWithOrdinalAndSetDuplicateReadFlag
public SamRecordWithOrdinalAndSetDuplicateReadFlag() -
SamRecordWithOrdinalAndSetDuplicateReadFlag
public SamRecordWithOrdinalAndSetDuplicateReadFlag(htsjdk.samtools.SAMRecord record, long recordIndex)
-
-
Method Details
-
setResultState
public void setResultState(boolean resultState) - Specified by:
setResultState
in classhtsjdk.samtools.util.SamRecordWithOrdinal
-