deb_control_files:
- control
- md5sums
deb_fields:
Architecture: amd64
Depends: perl:any, spades, velvet, skesa, megahit, flash, lighter, samtools, bwa,
kmc, seqtk, pilon, trimmomatic, pigz, samclip
Description: |-
Assemble bacterial isolate genomes from Illumina paired-end reads
Shovill is a pipeline which uses SPAdes at its core,
but alters the steps before and after the primary
assembly step to get similar results in less time.
Shovill also supports other assemblers like SKESA,
Velvet and Megahit, so you can take advantage of the
pre- and post-processing the Shovill provides
with those too.
Homepage: https://github.com/tseemann/shovill
Installed-Size: '40'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: shovill
Priority: optional
Section: science
Version: 1.1.0-9
srcpkg_name: shovill
srcpkg_version: 1.1.0-9