deb_control_files:
- control
- md5sums
deb_fields:
Architecture: arm64
Depends: libc6 (>= 2.29), zlib1g (>= 1:1.1.4), python3:any, python3-reportlab
Description: "estimate PCR barcode primers quality\n DNA barcoding is a tool for\
\ characterizing the species origin using a\n short sequence from a standard position\
\ and agreed upon position in the\n genome. To be used as a DNA barcode, a genome\
\ locus should vary among\n individuals of the same species only to a minor degree\
\ and it should\n vary among species very quickly. From a practical point of view,\
\ a\n barcode locus should be \uFB02anked by two conserved regions to design PCR\n\
\ primers. Several manually discovered barcode loci like COI, rbcL, 18S,\n 16S\
\ and 23S rDNA, or trnH-ps are routinely used today, but no objective\n function\
\ has been described to measure their quality in terms of\n universality (barcode\
\ coverage, Bc ) or in terms of taxonomical\n discrimination capacity (barcode\
\ speci\uFB01city, Bs ).\n .\n ecoPCR is an electronic PCR software developed\
\ by LECA and\n Helix-Project. It helps to estimate Barcode primers quality. In\n\
\ conjunction with OBITools you can postprocess ecoPCR output to compute\n barcode\
\ coverage and barcode speci\uFB01city. New barcode primers can be\n developed\
\ using the ecoPrimers software"
Homepage: https://git.metabarcoding.org/obitools/ecopcr/wikis/home
Installed-Size: '228'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: ecopcr
Priority: optional
Section: science
Version: 1.0.1+dfsg-4
srcpkg_name: ecopcr
srcpkg_version: 1.0.1+dfsg-4