deb_control_files:
- control
- md5sums
deb_fields:
Architecture: all
Description: |-
library for use in ggd
Takes a genome file and (currently) a .vcf.gz or
a .bed.gz and checks that:
.
* a .tbi is present
* the VCF has ""##fileformat=VCF" as the first
line
* the VCF has a #CHROM header
* the chromosome are in the order specified by
the genome file (and present)
* the positions are sorted
* the positions are <= the chromosome lengths
defined in the genome file.
.
As a result, any new genome going into GGD will have
a .genome file that will dictate the sort order
and presence or absence of the 'chr' prefix for chromosomes
.
This is the library package for ggd-utils
Homepage: https://github.com/gogetdata/ggd-utils
Installed-Size: '27'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Multi-Arch: foreign
Package: golang-github-gogetdata-ggd-utils-dev
Priority: optional
Section: science
Source: ggd-utils
Version: 1.0.0+ds-1
srcpkg_name: ggd-utils
srcpkg_version: 1.0.0+ds-1