deb_control_files:
- control
- md5sums
deb_fields:
Architecture: amd64
Built-Using: simde (= 0.7.4~rc2-2)
Conflicts: ffindex
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgomp1 (>= 6), libstdc++6 (>= 11),
perl:any, hhsuite-data (= 3.3.0+ds-7), python3
Description: |-
sensitive protein sequence searching based on HMM-HMM alignment
HH-suite is an open-source software package for sensitive protein sequence
searching based on the pairwise alignment of hidden Markov models (HMMs).
.
This package contains HHsearch and HHblits among other programs and utilities.
.
HHsearch takes as input a multiple sequence alignment (MSA) or profile HMM
and searches a database of HMMs (e.g. PDB, Pfam, or InterPro) for homologous
proteins. HHsearch is often used for protein structure prediction to detect
homologous templates and to build highly accurate query-template pairwise
alignments for homology modeling.
.
HHblits can build high-quality MSAs starting from single sequences or from
MSAs. It transforms these into a query HMM and, using an iterative search
strategy, adds significantly similar sequences from the previous search to
the updated query HMM for the next search iteration. Compared to PSI-BLAST,
HHblits is faster, up to twice as sensitive and produces more accurate
alignments.
Homepage: https://toolkit.tuebingen.mpg.de/
Installed-Size: '463608'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: hhsuite
Priority: optional
Section: science
Source: hhsuite (3.3.0+ds-7)
Version: 3.3.0+ds-7+b2
srcpkg_name: hhsuite
srcpkg_version: 3.3.0+ds-7