Basic Statistics
Measure | Value |
---|---|
Filename | SRR3192401_1_val_1.fq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 95236637 |
Sequences flagged as poor quality | 0 |
Sequence length | 20-100 |
%GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 122905 | 0.0 | 48.271976 | 1 |
GTATCAA | 201570 | 0.0 | 34.79645 | 1 |
GAGTACA | 231030 | 0.0 | 32.49509 | 1 |
AGTACAT | 242860 | 0.0 | 30.21477 | 2 |
GTACATG | 351515 | 0.0 | 30.193144 | 1 |
TACATGG | 360060 | 0.0 | 29.08031 | 2 |
CAACGCA | 246400 | 0.0 | 27.837027 | 5 |
ATCAACG | 248785 | 0.0 | 27.4604 | 3 |
ACATGGG | 385180 | 0.0 | 26.672392 | 3 |
TCAACGC | 263000 | 0.0 | 26.262726 | 4 |
TATCAAC | 267870 | 0.0 | 25.892212 | 2 |
AACGCAG | 267930 | 0.0 | 25.869684 | 6 |
GTACTAG | 27795 | 0.0 | 25.33537 | 1 |
CTAGTAC | 37205 | 0.0 | 25.153667 | 3 |
CTAACGC | 15185 | 0.0 | 25.130709 | 3 |
CATGGGG | 308915 | 0.0 | 24.543371 | 4 |
TAACGCC | 15470 | 0.0 | 24.526138 | 4 |
CTGTGCG | 39095 | 0.0 | 23.59801 | 9 |
TCTAACG | 16235 | 0.0 | 22.91225 | 2 |
TCGACGG | 16915 | 0.0 | 22.819368 | 94 |