deb_control_files:
- control
- md5sums
deb_fields:
Architecture: arm64
Depends: libc6 (>= 2.38), libgatbcore3 (>= 1.4.2+dfsg-7), libgcc-s1 (>= 3.0), libhdf5-103-1t64,
libstdc++6 (>= 13.1)
Description: |-
performs detection and assembly of DNA insertion variants in NGS read datasets
Designed to call insertions of any size, whether they are novel or
duplicated, homozygous or heterozygous in the donor genome. It takes as
input a set of reads and a reference genome. It outputs two sets of
FASTA sequences: one is the set of breakpoints of detection insertion
sites, the other is the set of assembled insertions for each
breakpoint. MindTheGap can also be used as a genome assembly finishing
tool. It can fill the gaps between a set of input contigs without any a
priori on their relative order and orientation. It outputs the results
in gfa file.
Homepage: https://github.com/GATB/MindTheGap
Installed-Size: '1049'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: mindthegap
Priority: optional
Section: science
Version: 2.3.0-4
srcpkg_name: mindthegap
srcpkg_version: 2.3.0-4