deb_control_files:
- control
- md5sums
deb_fields:
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.19, r-bioc-genomicranges (>= 1.56.1), r-bioc-rtracklayer
(>= 1.64.0), r-bioc-variantannotation (>= 1.50.0), r-bioc-biocgenerics (>= 0.50.0),
r-cran-assertthat, r-bioc-biostrings (>= 2.72.1), r-bioc-pwalign (>= 1.0.0-2~0exp1),
r-cran-stringr, r-cran-dplyr, r-cran-rlang, r-bioc-genomicfeatures (>= 1.56.0),
r-bioc-iranges (>= 2.38.1), r-bioc-s4vectors (>= 0.42.1), r-bioc-summarizedexperiment
(>= 1.34.0), r-bioc-genomeinfodb (>= 1.40.1)
Description: |-
Variant annotations for structural variants
StructuralVariantAnnotation contains useful helper
functions for dealing with structural variants in VCF format.
The packages contains functions for parsing VCFs from a number
of popular callers as well as functions for dealing with
breakpoints involving two separate genomic loci encoded as
GRanges objects.
Homepage: https://bioconductor.org/packages/StructuralVariantAnnotation/
Installed-Size: '1297'
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Package: r-bioc-structuralvariantannotation
Priority: optional
Section: gnu-r
Suggests: r-cran-ggplot2, r-cran-devtools, r-cran-testthat (>= 2.1.0), r-cran-roxygen2,
r-cran-rmarkdown, r-cran-tidyverse, r-cran-knitr, r-bioc-ggbio (>= 1.52.0), r-bioc-biovizbase
(>= 1.52.0)
Version: 1.20.0+ds-1
srcpkg_name: r-bioc-structuralvariantannotation
srcpkg_version: 1.20.0+ds-1