skbio.diversity.get_beta_diversity_metrics¶
- skbio.diversity.get_beta_diversity_metrics()[source]¶
List scikit-bio’s beta diversity metrics.
The beta diversity metrics listed here can be passed as metrics to
skbio.diversity.beta_diversity
.- Returns:
- list of str
Alphabetically sorted list of beta diversity metrics implemented in scikit-bio.
See also
beta_diversity
get_alpha_diversity_metrics
scipy.spatial.distance.pdist
Notes
SciPy implements many additional beta diversity metrics that are not included in this list. See documentation for
scipy.spatial.distance.pdist
for more details.