deb_control_files:
- control
- md5sums
deb_fields:
Architecture: amd64
Depends: libc6 (>= 2.38), libcairo2 (>= 1.2.4), libcurl4t64 (>= 7.16.2), libgbtools0t64
(>= 4.44.1+dfsg), libgcc-s1 (>= 3.0), libglib2.0-0t64 (>= 2.76.0), libgtk2.0-0t64
(>= 2.14.0), libpango-1.0-0 (>= 1.14.0), libsqlite3-0 (>= 3.5.9), libstdc++6 (>=
5.2)
Description: |-
interactive browser of sequence alignments
Blixem is an interactive browser of sequence alignments that have been
stacked up in a "master-slave" multiple alignment; it is not a 'true'
multiple alignment but a 'one-to-many' alignment.
.
* Overview section showing the positions of genes and alignments around
the alignment window
* Detail section showing the actual alignment of protein or nucleotide
sequences to the genomic DNA sequence.
* View alignments against both strands of the reference sequence.
* View sequences in nucleotide or protein mode; in protein mode, Blixem
will display the three-frame translation of the reference sequence.
* Residues are highlighted in different colours depending on whether
they are an exact match, conserved substitution or mismatch.
* Gapped alignments are supported, with insertions and deletions being
highlighted in the match sequence.
* Matches can be sorted and filtered.
* SNPs and other variations can be highlighted in the reference
sequence.
* Poly(A) tails can be displayed and poly(A) signals highlighted in the
reference sequence.
Homepage: https://www.sanger.ac.uk/science/tools/seqtools
Installed-Size: '2220'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: blixem
Priority: optional
Section: science
Source: seqtools (4.44.1+dfsg-7.1)
Version: 4.44.1+dfsg-7.1+b2
srcpkg_name: seqtools
srcpkg_version: 4.44.1+dfsg-7.1