Uses of Class
org.snpeff.binseq.comparator.SubsequenceComparator
Packages that use SubsequenceComparator
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Uses of SubsequenceComparator in org.snpeff.binseq.comparator
Subclasses of SubsequenceComparator in org.snpeff.binseq.comparatorModifier and TypeClassDescriptionclass
Compares two subsequences of DNA (DnaAndQualitySequence)class
DnaSubsequenceComparator<T extends DnaSequence>
Compares two subsequences of DNA (DnaSequence) -
Uses of SubsequenceComparator in org.snpeff.binseq.indexer
Constructors in org.snpeff.binseq.indexer with parameters of type SubsequenceComparatorModifierConstructorDescriptionSequenceIndexer
(SubsequenceComparator<T> subsequenceComparator) SuffixIndexerNmer
(SubsequenceComparator<T> subsequenceComparator, int nmerSize)