Package org.snpeff.stats
Class ChrPosStats
java.lang.Object
org.snpeff.stats.ChrPosStats
- Direct Known Subclasses:
PosStats
How many changes per position do we have in a chromosome.
Summary by dividing the chromosome into MAX_BINS bins
- Author:
- pcingola
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Field Summary
Fields -
Constructor Summary
Constructors -
Method Summary
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Field Details
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debug
public static boolean debug
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Constructor Details
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ChrPosStats
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Method Details
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getCount
public int getCount(int idx) -
getTotal
public int getTotal() -
posArray
public int[] posArray() -
sample
public void sample(int position) Use 'num' as a sample- Parameters:
num
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size
public int size() -
toString
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toStringHistoPlot
Create a histogram plot using Google charts- Returns:
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