Package org.snpeff.ped
Class PedFileIterator
PED file iterator (PED file from PLINK)
Reference: http://pngu.mgh.harvard.edu/~purcell/plink/data.shtml
- Author:
- pcingola
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Field Summary
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Constructor Summary
Constructors -
Method Summary
Methods inherited from class org.snpeff.fileIterator.FileIterator
close, countNewLineChars, getFilePointer, getLine, getLineNum, guessNewLineChars, hasNext, hasSeek, init, isDebug, iterator, load, next, readLine, ready, remove, seek, setAutoClose, setDebug, setVerbose, toString
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
Methods inherited from interface java.lang.Iterable
forEach, spliterator
Methods inherited from interface java.util.Iterator
forEachRemaining
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Constructor Details
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PedFileIterator
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Method Details
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getPlinkMap
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readNext
Description copied from class:FileIterator
Read next element- Specified by:
readNext
in classFileIterator<PedEntry>
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