Uses of Class
org.snpeff.svg.Svg
Packages that use Svg
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Uses of Svg in org.snpeff.svg
Subclasses of Svg in org.snpeff.svgModifier and TypeClassDescriptionclass
Create an SVG representation of a BND (translocation) variant In a VCF file, there are four possible translocations (BND) entries: REF ALT Meaning type 1: s t[p[ piece extending to the right of p is joined after t type 2: s t]p] reverse comp piece extending left of p is joined after t type 3: s ]p]t piece extending to the left of p is joined before t type 4: s [p[t reverse comp piece extending right of p is joined before tclass
Create an SVG representation of a Markerclass
Create an SVG representation of a Markerclass
Create an SVG representation of a Markerclass
Create an SVG representation of a Markerclass
Create an SVG representation of a NextProt annotation tracksclass
Create an SVG representation of a "Scale and Chromsome labelsclass
Leave an empty vertical spaceclass
Create an SVG representation of a transcriptclass
Create an SVG representation of a BND (translocation) variant In a VCF file, there are four possible translocations (BND) entries: REF ALT Meaning type 1: s t[p[ piece extending to the right of p is joined after t type 2: s t]p] reverse comp piece extending left of p is joined after t type 3: s ]p]t piece extending to the left of p is joined before t type 4: s [p[t reverse comp piece extending right of p is joined before tMethods in org.snpeff.svg that return SvgMethods in org.snpeff.svg with parameters of type SvgConstructors in org.snpeff.svg with parameters of type SvgModifierConstructorDescriptionSvgBnd
(VariantBnd varBnd, Svg svgTr1, Svg svgTr2) SvgNextProt
(Transcript tr, Svg svg, Markers nextprotMarkers) SvgTranscript
(Transcript tr, Svg svg)