Class Intergenic

All Implemented Interfaces:
Serializable, Cloneable, Comparable<Interval>, TxtSerializable

public class Intergenic extends Marker
Interval for in intergenic region
Author:
pcingola
See Also:
  • Field Details

  • Constructor Details

    • Intergenic

      public Intergenic()
    • Intergenic

      public Intergenic(Chromosome parent, int start, int end, boolean strandMinus, String id, String name)
  • Method Details

    • createIntergenic

      public static Intergenic createIntergenic(Gene geneLeft, Gene geneRight)
      Creates an intergenic marker based on the "space" between two genes
      Returns:
      null if the marker cannot be created
    • cloneShallow

      public Intergenic cloneShallow()
      Description copied from class: Marker
      Perform a shallow clone
      Overrides:
      cloneShallow in class Marker
    • getName

      public String getName()