Class TranslocationReport

java.lang.Object
org.snpeff.stats.TranslocationReport

public class TranslocationReport extends Object
Pojo for translocation reports
Author:
pcingola
  • Constructor Details

  • Method Details

    • getChr1

      public String getChr1()
    • getChr2

      public String getChr2()
    • getGeneName1

      public String getGeneName1()
    • getGeneName2

      public String getGeneName2()
    • getHgvsC

      public String getHgvsC()
    • getHgvsP

      public String getHgvsP()
    • getImpact

      public String getImpact()
    • getIndex

      public String getIndex()
    • getPos1OneBased

      public int getPos1OneBased()
      Get position (as one-based coordinates)
    • getPos2OneBased

      public int getPos2OneBased()
      Get position (as one-based coordinates)
    • getSvgPlot

      public String getSvgPlot()
    • getTrId1

      public String getTrId1()
    • getTrId2

      public String getTrId2()
    • getVariantEffect

      public String getVariantEffect()
    • getVcfEffect

      public String getVcfEffect()
    • setSvgPlot

      public void setSvgPlot(String svgPlot)