Uses of Class
org.snpsift.annotate.mem.Fields
Packages that use Fields
Package
Description
-
Uses of Fields in org.snpsift.annotate.mem
Methods in org.snpsift.annotate.mem that return Fields -
Uses of Fields in org.snpsift.annotate.mem.database
Methods in org.snpsift.annotate.mem.database that return FieldsModifier and TypeMethodDescriptionVariantDatabase.getFields()
protected Fields
VariantDatabase.parseVcfHeaderFields
(String databaseVcfFileName) Read VCF header and get columns data typesprotected Fields
VariantDatabase.parseVcfHeaderFields
(org.snpeff.fileIterator.VcfFileIterator vcfFileIterator) Read VCF header and get columns data types -
Uses of Fields in org.snpsift.annotate.mem.variantTypeCounter
Fields in org.snpsift.annotate.mem.variantTypeCounter declared as FieldsMethods in org.snpsift.annotate.mem.variantTypeCounter that return FieldsConstructors in org.snpsift.annotate.mem.variantTypeCounter with parameters of type FieldsModifierConstructorDescriptionVariantTypeCounter
(Fields fields) VariantTypeCounters
(Fields fields, boolean verbose)