Class Fields

java.lang.Object
org.snpsift.annotate.mem.Fields
All Implemented Interfaces:
Serializable, Iterable<org.snpeff.vcf.VcfHeaderInfo>

public class Fields extends Object implements Iterable<org.snpeff.vcf.VcfHeaderInfo>, Serializable
See Also:
  • Constructor Details

    • Fields

      public Fields()
  • Method Details

    • load

      public static Fields load(String fileName)
    • add

      public void add(org.snpeff.vcf.VcfHeaderInfo field)
    • get

      public org.snpeff.vcf.VcfHeaderInfo get(String name)
    • getNames

      public String[] getNames()
    • iterator

      public Iterator<org.snpeff.vcf.VcfHeaderInfo> iterator()
      Specified by:
      iterator in interface Iterable<org.snpeff.vcf.VcfHeaderInfo>
    • save

      public void save(String fileName)
      Save to file
    • vcfHeaders

      public Collection<org.snpeff.vcf.VcfHeaderEntry> vcfHeaders(String prefix)
      Get VCF headers