deb_control_files:
- control
- md5sums
- postinst
- prerm
deb_fields:
Architecture: all
Depends: python3-biopython, python3-pysam, python3:any, bowtie2, cutadapt, samtools
Description: |-
Integrating genetic variations in miRNA alignment
OptimiR is a miRSeq data alignment workflow. It integrates genetic information
to assess the impact of variants on miRNA expression.
.
OptimiR: A bioinformatics pipeline designed to detect and quantify miRNAs,
isomiRs and polymiRs from miRSeq data, & study the impact of genetic
variations on polymiRs' expression.
Homepage: https://github.com/FlorianThibord/OptimiR
Installed-Size: '7403'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: optimir
Priority: optional
Recommends: r-cran-gridextra, r-cran-ggplot2
Section: science
Version: 1.2-2
srcpkg_name: optimir
srcpkg_version: 1.2-2