libStatGen Software 1
SamHeaderSQ.cpp
1/*
2 * Copyright (C) 2010 Regents of the University of Michigan
3 *
4 * This program is free software: you can redistribute it and/or modify
5 * it under the terms of the GNU General Public License as published by
6 * the Free Software Foundation, either version 3 of the License, or
7 * (at your option) any later version.
8 *
9 * This program is distributed in the hope that it will be useful,
10 * but WITHOUT ANY WARRANTY; without even the implied warranty of
11 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
12 * GNU General Public License for more details.
13 *
14 * You should have received a copy of the GNU General Public License
15 * along with this program. If not, see <http://www.gnu.org/licenses/>.
16 */
17
18#include "SamHeaderSQ.h"
19
20// Constructor
21SamHeaderSQ::SamHeaderSQ()
22{
23 // Add required tags for this type.
24 myType = SamHeaderRecord::SQ;
25 myTypeString = "SQ";
26 addRequiredTag("SN");
27 addRequiredTag("LN");
28 myKeyTag = "SN";
29}
30
31
32// Destructor
33SamHeaderSQ::~SamHeaderSQ()
34{
35}
36
37
39{
40 SamHeaderSQ* newSQ = new SamHeaderSQ();
41 if(newSQ == NULL)
42 {
43 std::cerr << "Failed to create a copy of an SQ Header Record\n" ;
44 return(NULL);
45 }
46 internalCopy(*newSQ);
47
48 return(newSQ);
49}
This class encapsulates the tag value pairs contained with a SAM Header line with accessors for getti...
@ SQ
Sequence Dictionary.
virtual SamHeaderRecord * createCopy() const
Return a pointer to a newly created header record of the appropriate type that is a copy of this reco...
Definition: SamHeaderSQ.cpp:38