libStatGen Software 1
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Weight includes various penalties(e.g. More...
#include <GreedyTupleAligner.h>
Public Attributes | |
int | gapOpen |
int | gapExtend |
int | mismatch |
int | match |
Weight includes various penalties(e.g.
gap open) used in local alignment
Definition at line 40 of file GreedyTupleAligner.h.
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inline |
Definition at line 43 of file GreedyTupleAligner.h.
int Weight::gapExtend |
Definition at line 50 of file GreedyTupleAligner.h.
int Weight::gapOpen |
Definition at line 49 of file GreedyTupleAligner.h.
int Weight::match |
Definition at line 52 of file GreedyTupleAligner.h.
int Weight::mismatch |
Definition at line 51 of file GreedyTupleAligner.h.